Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-methyltransferase yrrm | SAMN04244553_0601 | Not Available | Positive | 413748 - 414413 | 23332.5 |
| inhibitor of the kina pathway to sporulation, predicted exonuclease | SAMN04244553_0602 | Not Available | Negative | 414460 - 415035 | 20941.8 |
| transcriptional regulator, tetr family | SAMN04244553_0603 | Not Available | Negative | 415105 - 415860 | 27570.5 |
| abc-2 type transport system atp-binding protein | SAMN04244553_0604 | Not Available | Positive | 415969 - 416913 | 33838.6 |
| abc-type multidrug transport system, permease component | SAMN04244553_0605 | Not Available | Positive | 416910 - 417755 | 29910.2 |
| nadph:quinone reductase | SAMN04244553_0606 | Not Available | Negative | 417860 - 418855 | 33844.7 |
| transcriptional regulator, tetr family | SAMN04244553_0607 | Not Available | Negative | 418890 - 419564 | 24714.5 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN04244553_0608 | Not Available | Positive | 419655 - 421157 | 51400.0 |
| hypothetical protein | SAMN04244553_0609 | Not Available | Negative | 421132 - 421863 | 28347.3 |
| short-chain dehydrogenase | SAMN04244553_0610 | Not Available | Positive | 421957 - 422835 | 31482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

