Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_5010 | Not Available | Positive | 5361831 - 5362655 | 30406.6 |
| hypothetical protein | SAMN04244553_5011 | Not Available | Positive | 5362727 - 5363635 | 31754.0 |
| short-chain dehydrogenase | SAMN04244553_5012 | Not Available | Negative | 5363906 - 5364889 | 35644.4 |
| hypothetical protein | SAMN04244553_5013 | Not Available | Positive | 5364969 - 5365499 | 19112.8 |
| error-prone dna polymerase | SAMN04244553_5014 | Not Available | Positive | 5365628 - 5368984 | 121274.0 |
| ribbon-helix-helix protein, copg family | SAMN04244553_5015 | Not Available | Positive | 5369022 - 5369264 | 8973.76 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN04244553_5016 | Not Available | Positive | 5369261 - 5369695 | 15955.2 |
| protein of unknown function | SAMN04244553_5017 | Not Available | Positive | 5369766 - 5370725 | 33326.9 |
| hypothetical protein | SAMN04244553_5018 | Not Available | Positive | 5370679 - 5370912 | 8385.26 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN04244553_5019 | Not Available | Negative | 5371244 - 5371696 | 16475.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

