Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mspa protein | SAMN04244553_5000 | Not Available | Negative | 5347880 - 5348521 | 21790.9 |
| wd40 repeat | SAMN04244553_5001 | Not Available | Negative | 5348651 - 5352703 | 145876.0 |
| mspa protein | SAMN04244553_5002 | Not Available | Negative | 5352955 - 5353611 | 22347.4 |
| phage shock protein c (pspc) family protein | SAMN04244553_5003 | Not Available | Positive | 5354113 - 5355525 | 49373.6 |
| two component transcriptional regulator, luxr family | SAMN04244553_5004 | Not Available | Positive | 5355877 - 5356518 | 22842.3 |
| serine/threonine protein kinase | SAMN04244553_5005 | Not Available | Negative | 5356600 - 5357724 | 39237.6 |
| hypothetical protein | SAMN04244553_5006 | Not Available | Positive | 5357960 - 5358712 | 25953.4 |
| protein imub | SAMN04244553_5007 | Not Available | Positive | 5358753 - 5360300 | 54870.9 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_5008 | Not Available | Negative | 5360486 - 5361355 | 29873.9 |
| transcriptional regulator, hxlr family | SAMN04244553_5009 | Not Available | Positive | 5361413 - 5361769 | 13141.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

