Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_4990 | Not Available | Positive | 5337279 - 5337857 | 20714.0 |
| anti-sigma-d factor rsda to sigma factor binding region | SAMN04244553_4991 | Not Available | Positive | 5337850 - 5338950 | 38008.3 |
| hypothetical protein | SAMN04244553_4992 | Not Available | Negative | 5339160 - 5339573 | 15186.4 |
| inosine-5'-monophosphate dehydrogenase | SAMN04244553_4993 | Not Available | Positive | 5339854 - 5341398 | 53571.7 |
| imp dehydrogenase | SAMN04244553_4994 | Not Available | Positive | 5341805 - 5342965 | 40630.8 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4995 | Not Available | Negative | 5343029 - 5343829 | 29350.7 |
| gmp synthase (glutamine-hydrolyzing) | SAMN04244553_4996 | Not Available | Positive | 5343988 - 5345568 | 56479.1 |
| hypothetical protein | SAMN04244553_4997 | Not Available | Negative | 5345627 - 5345797 | 5813.75 |
| hypothetical protein | SAMN04244553_4998 | Not Available | Negative | 5345823 - 5346038 | 7213.99 |
| phage shock protein c (pspc) family protein | SAMN04244553_4999 | Not Available | Negative | 5346031 - 5347821 | 61950.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

