Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caldesmon | SAMN04244553_4970 | Not Available | Positive | 5316115 - 5316522 | 15868.2 |
| serine/threonine protein kinase | SAMN04244553_4971 | Not Available | Positive | 5316648 - 5318306 | 58517.7 |
| alpha/beta hydrolase family protein | SAMN04244553_4972 | Not Available | Negative | 5318310 - 5319155 | 29152.1 |
| glutamine--fructose-6-phosphate transaminase | SAMN04244553_4973 | Not Available | Positive | 5319204 - 5321084 | 67537.5 |
| plastocyanin | SAMN04244553_4974 | Not Available | Negative | 5321140 - 5321547 | 14374.9 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN04244553_4975 | Not Available | Positive | 5321722 - 5323161 | 48227.8 |
| alanine racemase | SAMN04244553_4976 | Not Available | Positive | 5323690 - 5324820 | 39540.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4977 | Not Available | Positive | 5324875 - 5325984 | 39680.2 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN04244553_4978 | Not Available | Positive | 5326164 - 5326613 | 16158.2 |
| trna threonylcarbamoyl adenosine modification protein yeaz | SAMN04244553_4979 | Not Available | Positive | 5326715 - 5327416 | 24002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

