Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial translation initiation factor 1 (bif-1) | SAMN04244553_4920 | Not Available | Positive | 5258197 - 5258418 | 8489.46 |
| lsu ribosomal protein l36p | SAMN04244553_4921 | Not Available | Positive | 5258583 - 5258696 | 4403.67 |
| ssu ribosomal protein s13p | SAMN04244553_4922 | Not Available | Positive | 5258902 - 5259273 | 14141.3 |
| ssu ribosomal protein s11p | SAMN04244553_4923 | Not Available | Positive | 5259283 - 5259696 | 14696.5 |
| ssu ribosomal protein s4p | SAMN04244553_4924 | Not Available | Positive | 5259719 - 5260324 | 23470.4 |
| dna-directed rna polymerase subunit alpha | SAMN04244553_4925 | Not Available | Positive | 5260426 - 5261484 | 37960.9 |
| lsu ribosomal protein l17p | SAMN04244553_4926 | Not Available | Positive | 5261534 - 5262070 | 19154.6 |
| trna pseudouridine38-40 synthase | SAMN04244553_4927 | Not Available | Positive | 5262321 - 5263226 | 32561.5 |
| hsp20 family protein | SAMN04244553_4928 | Not Available | Negative | 5263275 - 5263718 | 16057.9 |
| probable f420-dependent oxidoreductase, msmeg_4141 family | SAMN04244553_4929 | Not Available | Positive | 5263868 - 5264695 | 29625.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

