Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | SAMN04244553_0591 | Not Available | Positive | 406075 - 406896 | 29285.3 |
| uncharacterized domain 1-containing protein | SAMN04244553_0592 | Not Available | Positive | 406940 - 407386 | 16422.6 |
| urease subunit gamma | SAMN04244553_0593 | Not Available | Positive | 407479 - 407781 | 11057.3 |
| urease subunit beta | SAMN04244553_0594 | Not Available | Positive | 407791 - 408126 | 11842.0 |
| urease. metallo peptidase. merops family m38 | SAMN04244553_0595 | Not Available | Positive | 408123 - 409844 | 60514.3 |
| hypothetical protein | SAMN04244553_0596 | Not Available | Negative | 409854 - 410633 | 26519.7 |
| ybab/ebfc dna-binding family protein | SAMN04244553_0597 | Not Available | Positive | 410785 - 411363 | 20645.9 |
| excreted virulence factor espc, type vii esx diderm | SAMN04244553_0598 | Not Available | Positive | 411470 - 411805 | 12223.3 |
| hypothetical protein | SAMN04244553_0599 | Not Available | Positive | 411809 - 412741 | 32416.9 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04244553_0600 | Not Available | Negative | 412755 - 413615 | 29459.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

