Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4890 | Not Available | Positive | 5155410 - 5155730 | 11447.2 |
| ybab/ebfc dna-binding family protein | SAMN04244553_4891 | Not Available | Positive | 5155789 - 5156301 | 18441.6 |
| autotransporter adhesin | SAMN04244553_4892 | Not Available | Positive | 5156319 - 5192873 | 1300230.0 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04244553_4893 | Not Available | Negative | 5192901 - 5193575 | 24613.9 |
| hypothetical protein | SAMN04244553_4894 | Not Available | Positive | 5193979 - 5195577 | 57891.1 |
| hypothetical protein | SAMN04244553_4895 | Not Available | Positive | 5195764 - 5196081 | 11871.9 |
| ybab/ebfc dna-binding family protein | SAMN04244553_4896 | Not Available | Positive | 5196158 - 5196652 | 18110.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04244553_4897 | Not Available | Positive | 5196669 - 5230124 | 1194200.0 |
| hypothetical protein | SAMN04244553_4898 | Not Available | Positive | 5230124 - 5230786 | 23793.0 |
| hypothetical protein | SAMN04244553_4899 | Not Available | Positive | 5230996 - 5233062 | 72987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

