Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l6p | SAMN04244553_4880 | Not Available | Positive | 5147050 - 5147589 | 19276.4 |
| lsu ribosomal protein l18p | SAMN04244553_4881 | Not Available | Positive | 5147592 - 5147999 | 14635.6 |
| ssu ribosomal protein s5p | SAMN04244553_4882 | Not Available | Positive | 5148031 - 5148678 | 22048.5 |
| lsu ribosomal protein l30p | SAMN04244553_4883 | Not Available | Positive | 5148681 - 5148860 | 6612.07 |
| lsu ribosomal protein l15p | SAMN04244553_4884 | Not Available | Positive | 5148862 - 5149305 | 15396.9 |
| protein translocase subunit secy/sec61 alpha | SAMN04244553_4885 | Not Available | Positive | 5149484 - 5150806 | 47681.0 |
| adenylate kinase | SAMN04244553_4886 | Not Available | Positive | 5150803 - 5151348 | 19819.7 |
| methionine aminopeptidase, type i | SAMN04244553_4887 | Not Available | Positive | 5151378 - 5152181 | 28139.7 |
| hypothetical protein | SAMN04244553_4888 | Not Available | Negative | 5153001 - 5154506 | 54440.9 |
| d-tyrosyl-trna(tyr) deacylase | SAMN04244553_4889 | Not Available | Negative | 5154658 - 5155089 | 15066.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

