Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l14p | SAMN04244553_4869 | Not Available | Positive | 5139727 - 5140095 | 13388.4 |
| lsu ribosomal protein l24p | SAMN04244553_4870 | Not Available | Positive | 5140097 - 5140411 | 11106.4 |
| lsu ribosomal protein l5p | SAMN04244553_4871 | Not Available | Positive | 5140413 - 5140976 | 21010.4 |
| ssu ribosomal protein s14p | SAMN04244553_4872 | Not Available | Positive | 5140980 - 5141165 | 6984.72 |
| endonuclease, uma2 family (restriction endonuclease fold) | SAMN04244553_4873 | Not Available | Negative | 5141259 - 5141912 | 25024.4 |
| protein of unknown function duf262 | SAMN04244553_4875 | Not Available | Positive | 5142290 - 5143465 | 44871.4 |
| predicted atpase | SAMN04244553_4876 | Not Available | Positive | 5143462 - 5144544 | 38413.6 |
| hypothetical protein | SAMN04244553_4877 | Not Available | Positive | 5144549 - 5145478 | 34677.1 |
| hypothetical protein | SAMN04244553_4878 | Not Available | Positive | 5146201 - 5146365 | 6184.65 |
| ssu ribosomal protein s8p | SAMN04244553_4879 | Not Available | Positive | 5146637 - 5147035 | 14328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

