Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4859 | Not Available | Positive | 5128338 - 5129393 | 37900.8 |
| hypothetical protein | SAMN04244553_4860 | Not Available | Positive | 5129470 - 5130522 | 38059.2 |
| sagb-type dehydrogenase domain-containing protein | SAMN04244553_4861 | Not Available | Negative | 5130491 - 5131873 | 49869.4 |
| iron complex transport system substrate-binding protein | SAMN04244553_4862 | Not Available | Negative | 5131906 - 5132886 | 34073.0 |
| hypothetical protein | SAMN04244553_4863 | Not Available | Positive | 5133000 - 5133152 | 6025.24 |
| hypothetical protein | SAMN04244553_4864 | Not Available | Positive | 5133200 - 5134288 | 39508.8 |
| cupin domain-containing protein | SAMN04244553_4865 | Not Available | Negative | 5134278 - 5134658 | 14096.7 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_4866 | Not Available | Negative | 5134707 - 5136167 | 48357.5 |
| transcriptional regulator, tetr family | SAMN04244553_4867 | Not Available | Positive | 5136705 - 5137301 | 22031.3 |
| putative endopeptidase | SAMN04244553_4868 | Not Available | Negative | 5137351 - 5139396 | 76104.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

