Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN04244553_4849 | Not Available | Negative | 5107530 - 5108912 | 48915.3 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN04244553_4850 | Not Available | Negative | 5109831 - 5110538 | 26358.0 |
| hypothetical protein | SAMN04244553_4851 | Not Available | Negative | 5110633 - 5111100 | 16049.2 |
| mycobactin lysine-n-oxygenase | SAMN04244553_4852 | Not Available | Positive | 5111258 - 5112544 | 46437.2 |
| protein n-acetyltransferase, rimj/riml family | SAMN04244553_4853 | Not Available | Negative | 5112548 - 5113213 | 24986.9 |
| surfactin synthase thioesterase subunit | SAMN04244553_4854 | Not Available | Positive | 5113386 - 5114141 | 27371.3 |
| mycobactin polyketide synthetase mbtc | SAMN04244553_4855 | Not Available | Positive | 5114169 - 5115491 | 45689.0 |
| mycobactin polyketide synthetase mbtd | SAMN04244553_4856 | Not Available | Positive | 5115484 - 5118579 | 109985.0 |
| mycobactin peptide synthetase mbtf | SAMN04244553_4857 | Not Available | Positive | 5118593 - 5123170 | 162004.0 |
| mycobactin peptide synthetase mbte | SAMN04244553_4858 | Not Available | Positive | 5123212 - 5128245 | 183087.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

