Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative drug exporter of the rnd superfamily | SAMN04244553_4839 | Not Available | Positive | 5092589 - 5094778 | 75997.7 |
| hypothetical protein | SAMN04244553_4840 | Not Available | Negative | 5094843 - 5097251 | 85712.6 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_4841 | Not Available | Negative | 5097404 - 5098624 | 44078.9 |
| caax protease self-immunity | SAMN04244553_4842 | Not Available | Negative | 5098748 - 5099491 | 25843.1 |
| hypothetical protein | SAMN04244553_4843 | Not Available | Positive | 5099707 - 5100114 | 14094.9 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN04244553_4844 | Not Available | Negative | 5100202 - 5101131 | 35203.4 |
| ppox class probable f420-dependent enzyme, rv3369 family | SAMN04244553_4845 | Not Available | Negative | 5101381 - 5101824 | 16345.0 |
| atp-binding cassette, subfamily b | SAMN04244553_4846 | Not Available | Positive | 5102032 - 5103882 | 66377.5 |
| atp-binding cassette, subfamily b | SAMN04244553_4847 | Not Available | Positive | 5103879 - 5105618 | 61589.8 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN04244553_4848 | Not Available | Negative | 5105852 - 5106559 | 26547.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

