Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | SAMN04244553_4819 | Not Available | Negative | 5077899 - 5079425 | 54500.4 |
| abc-2 type transport system atp-binding protein | SAMN04244553_4820 | Not Available | Positive | 5079826 - 5080830 | 35625.5 |
| abc-2 type transport system permease protein | SAMN04244553_4821 | Not Available | Positive | 5080827 - 5081645 | 29399.3 |
| abc-2 type transport system permease protein | SAMN04244553_4822 | Not Available | Positive | 5081642 - 5082490 | 30071.6 |
| lycopene beta-cyclase | SAMN04244553_4823 | Not Available | Negative | 5082659 - 5083942 | 46555.6 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN04244553_4824 | Not Available | Negative | 5084028 - 5084504 | 17328.2 |
| ssu ribosomal protein s10p | SAMN04244553_4825 | Not Available | Positive | 5085040 - 5085345 | 11503.1 |
| lsu ribosomal protein l3p | SAMN04244553_4826 | Not Available | Positive | 5085360 - 5086025 | 23170.9 |
| lsu ribosomal protein l4p | SAMN04244553_4827 | Not Available | Positive | 5086022 - 5086696 | 23992.6 |
| lsu ribosomal protein l23p | SAMN04244553_4828 | Not Available | Positive | 5086693 - 5086998 | 11136.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

