Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator | SAMN04244553_0581 | Not Available | Negative | 396851 - 397243 | 14366.1 |
| iron complex transport system atp-binding protein | SAMN04244553_0582 | Not Available | Negative | 397344 - 398177 | 29498.8 |
| iron complex transport system permease protein | SAMN04244553_0583 | Not Available | Negative | 398174 - 399295 | 37675.1 |
| iron complex transport system permease protein | SAMN04244553_0584 | Not Available | Negative | 399336 - 400382 | 36033.0 |
| hypothetical protein | SAMN04244553_0585 | Not Available | Positive | 400507 - 401217 | 25859.1 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04244553_0586 | Not Available | Positive | 401352 - 402053 | 26297.5 |
| signal transduction histidine kinase | SAMN04244553_0587 | Not Available | Positive | 402040 - 403440 | 50442.8 |
| hypothetical protein | SAMN04244553_0588 | Not Available | Positive | 403712 - 403915 | 7328.6 |
| mspa protein | SAMN04244553_0589 | Not Available | Negative | 404051 - 404725 | 22869.8 |
| mspa protein | SAMN04244553_0590 | Not Available | Negative | 404793 - 405467 | 22247.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

