Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4799 | Not Available | Positive | 5041563 - 5041901 | 12440.7 |
| hypothetical protein | SAMN04244553_4800 | Not Available | Negative | 5042441 - 5042755 | 12015.3 |
| hypothetical protein | SAMN04244553_4801 | Not Available | Negative | 5043152 - 5043661 | 18125.4 |
| transcriptional regulator, tetr family | SAMN04244553_4802 | Not Available | Negative | 5043724 - 5044320 | 21144.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4803 | Not Available | Positive | 5044386 - 5045231 | 30891.7 |
| predicted purr-regulated permease perm | SAMN04244553_4804 | Not Available | Positive | 5045305 - 5046684 | 49104.3 |
| fatty-acyl-coa synthase | SAMN04244553_4805 | Not Available | Negative | 5047023 - 5048660 | 58854.1 |
| cation diffusion facilitator family transporter | SAMN04244553_4806 | Not Available | Negative | 5048818 - 5050044 | 43190.3 |
| transcriptional regulator, arsr family | SAMN04244553_4807 | Not Available | Negative | 5050041 - 5050469 | 15855.1 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_4808 | Not Available | Positive | 5050548 - 5052011 | 54348.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

