Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN04244553_4787 | Not Available | Negative | 5033206 - 5034324 | 40136.3 |
| hypothetical protein | SAMN04244553_4789 | Not Available | Positive | 5035120 - 5035650 | 19379.2 |
| hypothetical protein | SAMN04244553_4790 | Not Available | Positive | 5035647 - 5036126 | 17541.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04244553_4791 | Not Available | Negative | 5036891 - 5037715 | 29761.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_4792 | Not Available | Positive | 5037836 - 5038561 | 24583.2 |
| hypothetical protein | SAMN04244553_4793 | Not Available | Positive | 5038789 - 5038929 | 5058.16 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_4794 | Not Available | Positive | 5038926 - 5039369 | 17170.8 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04244553_4795 | Not Available | Negative | 5039472 - 5040467 | 36649.1 |
| hypothetical protein | SAMN04244553_4796 | Not Available | Positive | 5040570 - 5040968 | 14376.1 |
| hypothetical protein | SAMN04244553_4798 | Not Available | Negative | 5041192 - 5041380 | 7285.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

