Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4767 | Not Available | Negative | 4999233 - 4999556 | 11184.1 |
| conserved dna-binding protein ybab | SAMN04244553_4768 | Not Available | Negative | 4999553 - 5000065 | 18452.3 |
| energy-coupling factor transport system permease protein | SAMN04244553_4769 | Not Available | Negative | 5000336 - 5001073 | 26155.3 |
| energy-coupling factor transport system atp-binding protein | SAMN04244553_4770 | Not Available | Negative | 5001070 - 5003208 | 74335.0 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_4771 | Not Available | Negative | 5003254 - 5004720 | 54243.4 |
| helix-turn-helix domain-containing protein | SAMN04244553_4772 | Not Available | Positive | 5004797 - 5005861 | 39276.4 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04244553_4773 | Not Available | Negative | 5005862 - 5006641 | 27605.8 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_4774 | Not Available | Negative | 5006809 - 5007216 | 14859.0 |
| tigr03086 family protein | SAMN04244553_4775 | Not Available | Positive | 5007301 - 5007936 | 22708.7 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN04244553_4776 | Not Available | Negative | 5008139 - 5008912 | 28657.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

