Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04244553_4747 | Not Available | Negative | 4975334 - 4976506 | 39032.3 |
| two-component system, ompr family, sensor histidine kinase prrb | SAMN04244553_4748 | Not Available | Negative | 4976613 - 4978001 | 48895.1 |
| two-component system, ompr family, response regulator prra | SAMN04244553_4749 | Not Available | Negative | 4978015 - 4978725 | 25389.8 |
| hemophore-related protein, rv0203/rv1174c family | SAMN04244553_4750 | Not Available | Negative | 4978764 - 4979150 | 13753.2 |
| propionyl-coa synthetase | SAMN04244553_4751 | Not Available | Negative | 4979273 - 4981348 | 74035.0 |
| signal transduction histidine kinase | SAMN04244553_4752 | Not Available | Positive | 4981693 - 4985517 | 133081.0 |
| hypothetical protein | SAMN04244553_4753 | Not Available | Positive | 4985514 - 4985927 | 14178.0 |
| protein of unknown function | SAMN04244553_4754 | Not Available | Positive | 4985935 - 4986309 | 13549.2 |
| gtp-binding protein | SAMN04244553_4755 | Not Available | Positive | 4986290 - 4986892 | 21827.2 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04244553_4756 | Not Available | Positive | 4986981 - 4988630 | 57925.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

