Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_4737 | Not Available | Positive | 4965259 - 4965576 | 10689.2 |
| hypothetical protein | SAMN04244553_4738 | Not Available | Negative | 4965622 - 4966365 | 26922.9 |
| protein of unknown function | SAMN04244553_4739 | Not Available | Negative | 4966631 - 4967722 | 38049.3 |
| phosphoserine aminotransferase apoenzyme | SAMN04244553_4740 | Not Available | Negative | 4967909 - 4969033 | 39999.1 |
| hypothetical protein | SAMN04244553_4741 | Not Available | Positive | 4969153 - 4969878 | 26431.5 |
| citrate synthase | SAMN04244553_4742 | Not Available | Negative | 4970005 - 4971153 | 41043.1 |
| pyridoxamine 5'-phosphate oxidase | SAMN04244553_4743 | Not Available | Positive | 4971312 - 4972067 | 27662.6 |
| predicted arabinose efflux permease, mfs family | SAMN04244553_4744 | Not Available | Positive | 4972133 - 4973416 | 44288.4 |
| citrate synthase | SAMN04244553_4745 | Not Available | Positive | 4973574 - 4974875 | 48391.5 |
| peptidylprolyl isomerase | SAMN04244553_4746 | Not Available | Positive | 4974909 - 4975268 | 12672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

