Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN04244553_4716 | Not Available | Positive | 4941976 - 4942614 | 21554.0 |
| peptidase family m1 | SAMN04244553_4717 | Not Available | Positive | 4942684 - 4944075 | 51207.8 |
| hypothetical protein | SAMN04244553_4718 | Not Available | Negative | 4944078 - 4944941 | 30744.9 |
| hypothetical protein | SAMN04244553_4719 | Not Available | Positive | 4945246 - 4945773 | 18646.0 |
| helicase conserved c-terminal domain-containing protein | SAMN04244553_4720 | Not Available | Negative | 4945774 - 4948071 | 81283.6 |
| hypothetical protein | SAMN04244553_4721 | Not Available | Positive | 4948289 - 4948486 | 7121.26 |
| protein of unknown function | SAMN04244553_4722 | Not Available | Negative | 4948632 - 4949261 | 21612.0 |
| hypothetical protein | SAMN04244553_4723 | Not Available | Negative | 4949640 - 4949921 | 10094.5 |
| cold-shock dna-binding protein family | SAMN04244553_4724 | Not Available | Positive | 4950034 - 4950510 | 17537.7 |
| protein of unknown function | SAMN04244553_4725 | Not Available | Negative | 4950621 - 4951151 | 18960.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

