Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04244553_4706 | Not Available | Negative | 4933035 - 4933634 | 21615.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_4707 | Not Available | Positive | 4933739 - 4934659 | 32779.0 |
| hypothetical protein | SAMN04244553_4708 | Not Available | Negative | 4934707 - 4934925 | 7242.21 |
| n-succinyldiaminopimelate aminotransferase | SAMN04244553_4709 | Not Available | Positive | 4935034 - 4936290 | 44799.5 |
| dihydrofolate reductase | SAMN04244553_4710 | Not Available | Positive | 4936327 - 4936869 | 19618.4 |
| caax protease self-immunity | SAMN04244553_4711 | Not Available | Negative | 4936887 - 4937510 | 22609.1 |
| uncharacterized membrane protein yeih | SAMN04244553_4712 | Not Available | Negative | 4937617 - 4938303 | 23744.2 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04244553_4713 | Not Available | Negative | 4938568 - 4939212 | 22216.1 |
| dna excision repair protein ercc-3 | SAMN04244553_4714 | Not Available | Positive | 4939551 - 4941209 | 61329.2 |
| protein of unknown function | SAMN04244553_4715 | Not Available | Positive | 4941250 - 4941918 | 24764.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

