Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4696 | Not Available | Negative | 4917602 - 4918042 | 14650.4 |
| putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate o-acyltransferase | SAMN04244553_4697 | Not Available | Negative | 4918146 - 4919627 | 52707.5 |
| glycerol-3-phosphate acyltransferase | SAMN04244553_4698 | Not Available | Negative | 4919624 - 4922074 | 89991.0 |
| salicylate synthetase | SAMN04244553_4699 | Not Available | Positive | 4922399 - 4923712 | 47239.8 |
| mycobactin salicyl-amp ligase | SAMN04244553_4700 | Not Available | Negative | 4923958 - 4925565 | 56998.8 |
| mycobactin phenyloxazoline synthetase | SAMN04244553_4701 | Not Available | Positive | 4925718 - 4929242 | 125908.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_4702 | Not Available | Positive | 4929311 - 4930189 | 31030.8 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04244553_4703 | Not Available | Positive | 4930350 - 4930823 | 17156.2 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04244553_4704 | Not Available | Positive | 4931102 - 4932193 | 38397.5 |
| methyltransferase domain-containing protein | SAMN04244553_4705 | Not Available | Negative | 4932259 - 4932948 | 23819.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

