Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl dehydratase | SAMN04244553_4665 | Not Available | Negative | 4888079 - 4889146 | 38955.0 |
| hypothetical protein | SAMN04244553_4666 | Not Available | Negative | 4889215 - 4890675 | 50167.0 |
| hypothetical protein | SAMN04244553_4667 | Not Available | Negative | 4890987 - 4892090 | 41953.7 |
| hypothetical protein | SAMN04244553_4668 | Not Available | Negative | 4892139 - 4893191 | 39010.5 |
| protein of unknown function | SAMN04244553_4669 | Not Available | Positive | 4893576 - 4894025 | 15839.5 |
| uncharacterized membrane protein ygae, upf0421/duf939 family | SAMN04244553_4670 | Not Available | Positive | 4894033 - 4895181 | 40519.9 |
| zn-dependent protease (includes spoivfb) | SAMN04244553_4671 | Not Available | Negative | 4895471 - 4896256 | 28155.8 |
| hypothetical protein | SAMN04244553_4672 | Not Available | Negative | 4896253 - 4896924 | 24079.2 |
| adenylosuccinate synthetase | SAMN04244553_4673 | Not Available | Positive | 4897184 - 4898473 | 46459.7 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | SAMN04244553_4674 | Not Available | Positive | 4898585 - 4901167 | 91382.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

