Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpb | SAMN04244553_4645 | Not Available | Positive | 4867825 - 4870380 | 92783.5 |
| hypothetical protein | SAMN04244553_4646 | Not Available | Positive | 4870404 - 4871261 | 28869.7 |
| hypothetical protein | SAMN04244553_4647 | Not Available | Positive | 4871383 - 4872420 | 38522.8 |
| hypothetical protein | SAMN04244553_4648 | Not Available | Positive | 4872446 - 4873258 | 28617.4 |
| orotate phosphoribosyltransferase | SAMN04244553_4649 | Not Available | Positive | 4873261 - 4873848 | 20583.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN04244553_4650 | Not Available | Positive | 4873899 - 4874957 | 36909.1 |
| yhhn-like protein | SAMN04244553_4651 | Not Available | Positive | 4874959 - 4875696 | 25396.8 |
| hypothetical protein | SAMN04244553_4652 | Not Available | Negative | 4875774 - 4876220 | 16360.1 |
| hypothetical protein | SAMN04244553_4653 | Not Available | Positive | 4876708 - 4877103 | 14604.4 |
| two component transcriptional regulator, luxr family | SAMN04244553_4654 | Not Available | Negative | 4877230 - 4877883 | 23492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

