Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_0556 | Not Available | Negative | 368351 - 369130 | 26936.2 |
| helix-turn-helix domain-containing protein | SAMN04244553_0557 | Not Available | Negative | 369204 - 370058 | 31526.4 |
| ketosteroid isomerase homolog | SAMN04244553_0558 | Not Available | Negative | 370572 - 371078 | 18916.5 |
| hypothetical protein | SAMN04244553_0561 | Not Available | Negative | 372594 - 373526 | 32716.1 |
| 3-ketosteroid 9alpha-monooxygenase subunit a | SAMN04244553_0562 | Not Available | Negative | 374552 - 375673 | 42334.6 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN04244553_0563 | Not Available | Negative | 375670 - 377124 | 49977.2 |
| hypothetical protein | SAMN04244553_0564 | Not Available | Positive | 377736 - 377993 | 9457.28 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_0565 | Not Available | Negative | 378240 - 379697 | 53373.6 |
| choline dehydrogenase | SAMN04244553_0566 | Not Available | Negative | 379694 - 381316 | 56614.3 |
| transcriptional regulator, tetr family | SAMN04244553_0567 | Not Available | Negative | 381320 - 382018 | 25353.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

