Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_4584 | Not Available | Negative | 4798177 - 4798479 | 11126.1 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04244553_4585 | Not Available | Positive | 4798619 - 4799173 | 19791.3 |
| hypothetical protein | SAMN04244553_4586 | Not Available | Positive | 4799199 - 4799549 | 12909.2 |
| cobq/cobb/mind/para nucleotide binding domain-containing protein | SAMN04244553_4587 | Not Available | Positive | 4799740 - 4800780 | 38484.4 |
| hypothetical protein | SAMN04244553_4588 | Not Available | Positive | 4800785 - 4801384 | 21100.3 |
| Trna-gly | Not Available | Not Available | Positive | 4802472 - 4802545 | Not Available |
| 3-(3-hydroxy-phenyl)propionate hydroxylase | SAMN04244553_4590 | Not Available | Negative | 4802900 - 4804387 | 53702.9 |
| transcriptional regulator, tetr family | SAMN04244553_4591 | Not Available | Positive | 4804457 - 4805146 | 25101.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_4592 | Not Available | Negative | 4805212 - 4805715 | 18708.3 |
| undecaprenyl-diphosphatase | SAMN04244553_4593 | Not Available | Negative | 4805661 - 4806389 | 25476.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

