Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| erythromycin esterase | SAMN04244553_4574 | Not Available | Negative | 4789241 - 4790470 | 44713.4 |
| protein of unknown function | SAMN04244553_4575 | Not Available | Negative | 4790550 - 4791656 | 40061.1 |
| enoyl-coa hydratase/carnithine racemase | SAMN04244553_4576 | Not Available | Negative | 4791800 - 4792576 | 27830.5 |
| acetyl-coa c-acetyltransferase | SAMN04244553_4577 | Not Available | Positive | 4792700 - 4794232 | 52599.1 |
| enoyl-coa hydratase | SAMN04244553_4578 | Not Available | Positive | 4794229 - 4794993 | 26291.8 |
| transcriptional regulator, tetr family | SAMN04244553_4579 | Not Available | Positive | 4794998 - 4795639 | 23854.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4580 | Not Available | Negative | 4795806 - 4796597 | 28229.8 |
| hypothetical protein | SAMN04244553_4581 | Not Available | Positive | 4796690 - 4796914 | 7604.85 |
| mrna interferase mazf | SAMN04244553_4582 | Not Available | Positive | 4796901 - 4797197 | 11157.3 |
| hypothetical protein | SAMN04244553_4583 | Not Available | Positive | 4797569 - 4797934 | 12343.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

