Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4564 | Not Available | Positive | 4778373 - 4778672 | 11141.4 |
| hypothetical protein | SAMN04244553_4565 | Not Available | Negative | 4778774 - 4779169 | 13758.1 |
| hypothetical protein | SAMN04244553_4566 | Not Available | Negative | 4779166 - 4780341 | 41791.4 |
| hypothetical protein | SAMN04244553_4567 | Not Available | Positive | 4780674 - 4780883 | 6730.2 |
| hypothetical protein | SAMN04244553_4568 | Not Available | Positive | 4781477 - 4781821 | 10811.6 |
| hypothetical protein | SAMN04244553_4569 | Not Available | Positive | 4782766 - 4783149 | 11916.0 |
| protein of unknown function | SAMN04244553_4570 | Not Available | Negative | 4783558 - 4784643 | 38715.0 |
| hypothetical protein | SAMN04244553_4571 | Not Available | Negative | 4784813 - 4786648 | 66341.9 |
| hypothetical protein | SAMN04244553_4572 | Not Available | Positive | 4786879 - 4787475 | 20964.2 |
| methyltransferase domain-containing protein | SAMN04244553_4573 | Not Available | Negative | 4787731 - 4788417 | 24633.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

