Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribosylglycohydrolase | SAMN04244553_4522 | Not Available | Positive | 4736535 - 4738124 | 54144.9 |
| beta-n-acetylhexosaminidase | SAMN04244553_4523 | Not Available | Positive | 4738606 - 4739769 | 40111.7 |
| transcriptional regulator, tetr family | SAMN04244553_4524 | Not Available | Positive | 4740043 - 4740642 | 21870.3 |
| hypothetical protein | SAMN04244553_4525 | Not Available | Positive | 4740747 - 4742651 | 65919.1 |
| acyl dehydratase | SAMN04244553_4526 | Not Available | Negative | 4742707 - 4743576 | 31758.4 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04244553_4527 | Not Available | Negative | 4743573 - 4744928 | 46282.5 |
| 3-ketoacyl-coa thiolase | SAMN04244553_4528 | Not Available | Positive | 4745176 - 4746498 | 46402.5 |
| helix-turn-helix domain-containing protein | SAMN04244553_4529 | Not Available | Negative | 4746681 - 4746881 | 6984.34 |
| 6-phosphogluconate dehydrogenase | SAMN04244553_4530 | Not Available | Negative | 4747046 - 4748074 | 36879.9 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN04244553_4531 | Not Available | Positive | 4748365 - 4752390 | 137701.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

