Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04244553_4512 | Not Available | Positive | 4723828 - 4725045 | 40930.2 |
| chloramphenicol 3-o phosphotransferase | SAMN04244553_4513 | Not Available | Negative | 4725193 - 4725813 | 22559.8 |
| hypothetical protein | SAMN04244553_4514 | Not Available | Positive | 4725918 - 4726082 | 6077.85 |
| protein of unknown function | SAMN04244553_4515 | Not Available | Negative | 4726157 - 4727311 | 41460.8 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04244553_4516 | Not Available | Positive | 4727514 - 4728749 | 44609.9 |
| arabinofuranan 3-o-arabinosyltransferase | SAMN04244553_4517 | Not Available | Negative | 4729333 - 4733493 | 145738.0 |
| protein of unknown function | SAMN04244553_4518 | Not Available | Negative | 4733540 - 4733710 | 5691.73 |
| isochorismate synthase | SAMN04244553_4519 | Not Available | Negative | 4733825 - 4734916 | 38332.6 |
| nucleotide-binding universal stress protein, uspa family | SAMN04244553_4520 | Not Available | Negative | 4734979 - 4735464 | 17544.1 |
| hypothetical protein | SAMN04244553_4521 | Not Available | Positive | 4735594 - 4736445 | 27133.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

