Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4481 | Not Available | Negative | 4685948 - 4687042 | 38824.6 |
| adenylate cyclase | SAMN04244553_4482 | Not Available | Negative | 4687048 - 4688535 | 52811.1 |
| predicted purr-regulated permease perm | SAMN04244553_4483 | Not Available | Positive | 4688567 - 4689928 | 47675.6 |
| signal transduction histidine kinase | SAMN04244553_4484 | Not Available | Positive | 4689906 - 4691084 | 41831.4 |
| two component transcriptional regulator, luxr family | SAMN04244553_4485 | Not Available | Positive | 4691120 - 4691785 | 23376.0 |
| protein of unknown function | SAMN04244553_4486 | Not Available | Positive | 4691869 - 4692546 | 23939.9 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_4487 | Not Available | Negative | 4692864 - 4694054 | 42810.9 |
| hypothetical protein | SAMN04244553_4488 | Not Available | Positive | 4694380 - 4694841 | 16582.4 |
| predicted membrane protein | SAMN04244553_4489 | Not Available | Positive | 4695755 - 4697389 | 55038.8 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04244553_4490 | Not Available | Negative | 4697533 - 4698756 | 43669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

