Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04244553_4471 | Not Available | Negative | 4677437 - 4677790 | 12830.6 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04244553_4472 | Not Available | Positive | 4677929 - 4678810 | 31556.2 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04244553_4473 | Not Available | Negative | 4678915 - 4679157 | 9058.88 |
| abc-2 type transport system permease protein | SAMN04244553_4474 | Not Available | Negative | 4679147 - 4679998 | 30079.8 |
| abc-2 type transport system atp-binding protein | SAMN04244553_4475 | Not Available | Negative | 4679995 - 4680924 | 34598.0 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_4476 | Not Available | Positive | 4681656 - 4682102 | 16502.9 |
| 3-dehydroquinate dehydratase | SAMN04244553_4477 | Not Available | Negative | 4682297 - 4682734 | 15600.8 |
| hypothetical protein | SAMN04244553_4478 | Not Available | Negative | 4682749 - 4683345 | 22127.3 |
| cell division protein ftsi/penicillin-binding protein 2 | SAMN04244553_4479 | Not Available | Positive | 4683733 - 4685409 | 59290.0 |
| protein of unknown function | SAMN04244553_4480 | Not Available | Negative | 4685471 - 4685830 | 12636.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

