Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04244553_4461 | Not Available | Positive | 4667820 - 4668797 | 34750.6 |
| abc-2 type transport system permease protein | SAMN04244553_4462 | Not Available | Positive | 4668794 - 4669564 | 27537.6 |
| mfs transporter, dha1 family, chloramphenicol resistance protein | SAMN04244553_4463 | Not Available | Positive | 4669908 - 4671101 | 40540.1 |
| putative zinc-finger | SAMN04244553_4464 | Not Available | Negative | 4671085 - 4671789 | 24920.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04244553_4465 | Not Available | Negative | 4671786 - 4672370 | 21815.8 |
| putative transcriptional regulator | SAMN04244553_4466 | Not Available | Negative | 4672437 - 4672991 | 19923.9 |
| acyltransferase | SAMN04244553_4467 | Not Available | Positive | 4673256 - 4674017 | 28016.8 |
| hypothetical protein | SAMN04244553_4468 | Not Available | Negative | 4674109 - 4674420 | 11677.8 |
| tap-like protein | SAMN04244553_4469 | Not Available | Positive | 4674581 - 4676167 | 55554.7 |
| glycerate kinase | SAMN04244553_4470 | Not Available | Negative | 4676273 - 4677370 | 36420.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

