Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04244553_4441 | Not Available | Negative | 4645784 - 4647298 | 54156.1 |
| hypothetical protein | SAMN04244553_4442 | Not Available | Negative | 4647298 - 4648290 | 35142.2 |
| hypothetical protein | SAMN04244553_4443 | Not Available | Negative | 4648290 - 4650203 | 66993.5 |
| ipoprotein lpqh | SAMN04244553_4444 | Not Available | Positive | 4650356 - 4650892 | 17219.9 |
| hypothetical protein | SAMN04244553_4445 | Not Available | Positive | 4651017 - 4651820 | 28657.9 |
| hypothetical protein | SAMN04244553_4446 | Not Available | Positive | 4651907 - 4653973 | 72972.8 |
| lysozyme | SAMN04244553_4447 | Not Available | Negative | 4654026 - 4654748 | 26133.8 |
| hypothetical protein | SAMN04244553_4448 | Not Available | Negative | 4654823 - 4656160 | 50811.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04244553_4449 | Not Available | Positive | 4656260 - 4657069 | 28952.6 |
| protein of unknown function | SAMN04244553_4450 | Not Available | Positive | 4657133 - 4657672 | 18743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

