Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4430 | Not Available | Positive | 4635145 - 4635462 | 11116.0 |
| acetyl-coa acyltransferase | SAMN04244553_4431 | Not Available | Negative | 4635567 - 4636736 | 40412.5 |
| transcriptional regulator, hxlr family | SAMN04244553_4432 | Not Available | Positive | 4636835 - 4637353 | 18866.9 |
| multiple sugar transport system atp-binding protein | SAMN04244553_4433 | Not Available | Negative | 4637554 - 4638648 | 39466.6 |
| probable f420-dependent oxidoreductase, msmeg_2906 family | SAMN04244553_4435 | Not Available | Positive | 4638866 - 4639660 | 28914.3 |
| cytochrome p450 | SAMN04244553_4436 | Not Available | Negative | 4639679 - 4641118 | 52084.8 |
| polar amino acid transport system substrate-binding protein | SAMN04244553_4437 | Not Available | Positive | 4641319 - 4643112 | 63104.8 |
| polar amino acid transport system atp-binding protein | SAMN04244553_4438 | Not Available | Positive | 4643116 - 4643841 | 25954.5 |
| hypothetical protein | SAMN04244553_4439 | Not Available | Positive | 4644091 - 4644444 | 12936.7 |
| chat domain-containing protein | SAMN04244553_4440 | Not Available | Negative | 4644516 - 4645787 | 45429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

