Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prevent-host-death family protein | SAMN04244553_4420 | Not Available | Negative | 4623983 - 4624240 | 9189.86 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN04244553_4421 | Not Available | Negative | 4624284 - 4624709 | 15565.4 |
| integron-associated effector binding protein | SAMN04244553_4422 | Not Available | Negative | 4624720 - 4625178 | 16789.7 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN04244553_4423 | Not Available | Negative | 4625478 - 4627751 | 80990.7 |
| multiple sugar transport system permease protein | SAMN04244553_4424 | Not Available | Negative | 4627941 - 4628810 | 31517.1 |
| multiple sugar transport system permease protein | SAMN04244553_4425 | Not Available | Negative | 4628855 - 4629889 | 37345.0 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN04244553_4426 | Not Available | Negative | 4629935 - 4631236 | 45871.9 |
| protein of unknown function | SAMN04244553_4427 | Not Available | Positive | 4631582 - 4632394 | 29019.4 |
| putative metallohydrolase, tigr04338 family | SAMN04244553_4428 | Not Available | Positive | 4632652 - 4633218 | 20743.7 |
| o-succinylbenzoate synthase | SAMN04244553_4429 | Not Available | Negative | 4633703 - 4634674 | 34728.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

