Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stress response protein scp2 | SAMN04244553_4410 | Not Available | Positive | 4611644 - 4612936 | 45243.2 |
| stress response protein scp2 | SAMN04244553_4411 | Not Available | Positive | 4612968 - 4614554 | 55586.8 |
| uncharacterized membrane protein | SAMN04244553_4412 | Not Available | Negative | 4614641 - 4616374 | 63268.2 |
| peptidoglycan glycosyltransferase | SAMN04244553_4413 | Not Available | Negative | 4616457 - 4619321 | 99610.4 |
| hypothetical protein | SAMN04244553_4414 | Not Available | Negative | 4619434 - 4619913 | 17726.3 |
| protein of unknown function | SAMN04244553_4415 | Not Available | Positive | 4619918 - 4621090 | 42152.8 |
| protein of unknown function | SAMN04244553_4416 | Not Available | Positive | 4621107 - 4621880 | 27811.0 |
| transcriptional regulator, padr family | SAMN04244553_4417 | Not Available | Positive | 4621995 - 4622552 | 21055.3 |
| l-myo-inositol-1-phosphate synthase | SAMN04244553_4418 | Not Available | Positive | 4622545 - 4623645 | 39638.3 |
| mrna interferase rele/stbe | SAMN04244553_4419 | Not Available | Negative | 4623717 - 4623986 | 10454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

