Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, merr family | SAMN04244553_4390 | Not Available | Positive | 4589301 - 4590023 | 26837.9 |
| transcriptional regulator, xre family with cupin sensor | SAMN04244553_4391 | Not Available | Negative | 4590062 - 4590682 | 22618.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4392 | Not Available | Positive | 4590770 - 4591861 | 39115.9 |
| replicative dna helicase | SAMN04244553_4393 | Not Available | Negative | 4592079 - 4595174 | 113827.0 |
| lsu ribosomal protein l9p | SAMN04244553_4394 | Not Available | Negative | 4595848 - 4596303 | 15894.2 |
| ssu ribosomal protein s18p | SAMN04244553_4395 | Not Available | Negative | 4596321 - 4596572 | 9292.42 |
| single-strand binding protein | SAMN04244553_4396 | Not Available | Negative | 4596629 - 4597180 | 18749.5 |
| ssu ribosomal protein s6p | SAMN04244553_4397 | Not Available | Negative | 4597273 - 4597560 | 10778.1 |
| uncharacterized membrane protein | SAMN04244553_4398 | Not Available | Positive | 4597927 - 4599309 | 49825.8 |
| uncharacterized hydrophobic domain-containing protein | SAMN04244553_4399 | Not Available | Positive | 4599671 - 4600633 | 33916.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

