Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase, ws/dgat/mgat | SAMN04244553_4370 | Not Available | Negative | 4568621 - 4569970 | 49356.7 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04244553_4371 | Not Available | Negative | 4570105 - 4570746 | 23354.1 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04244553_4372 | Not Available | Negative | 4570775 - 4571665 | 30919.7 |
| transcriptional regulator, tetr family | SAMN04244553_4373 | Not Available | Negative | 4571922 - 4572503 | 21349.3 |
| abc-2 type transport system atp-binding protein | SAMN04244553_4374 | Not Available | Positive | 4572586 - 4573506 | 32435.5 |
| abc-2 type transport system permease protein | SAMN04244553_4375 | Not Available | Positive | 4573509 - 4575155 | 56648.9 |
| thioesterase-like superfamily protein | SAMN04244553_4376 | Not Available | Positive | 4575514 - 4576326 | 28695.1 |
| cutinase | SAMN04244553_4377 | Not Available | Negative | 4576516 - 4578057 | 53357.6 |
| ef-hand domain pair | SAMN04244553_4378 | Not Available | Positive | 4578492 - 4578695 | 7665.71 |
| uncharacterized conserved protein, duf1330 family | SAMN04244553_4379 | Not Available | Negative | 4578897 - 4579244 | 12499.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

