Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_4338 | Not Available | Positive | 4530856 - 4531059 | 7126.32 |
| protein of unknown function | SAMN04244553_4339 | Not Available | Positive | 4531056 - 4531295 | 7907.2 |
| hypothetical protein | SAMN04244553_4340 | Not Available | Positive | 4531471 - 4531668 | 7126.08 |
| succinate dehydrogenase subunit b | SAMN04244553_4341 | Not Available | Negative | 4531743 - 4532489 | 28423.2 |
| succinate dehydrogenase subunit a | SAMN04244553_4342 | Not Available | Negative | 4532492 - 4534432 | 70700.6 |
| hypothetical protein | SAMN04244553_4343 | Not Available | Negative | 4534460 - 4535290 | 31314.1 |
| hypothetical protein | SAMN04244553_4344 | Not Available | Negative | 4535713 - 4536000 | 10857.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_4345 | Not Available | Negative | 4536266 - 4537228 | 34195.4 |
| hypothetical protein | SAMN04244553_4346 | Not Available | Negative | 4537730 - 4539685 | 70713.5 |
| aaa atpase domain-containing protein | SAMN04244553_4347 | Not Available | Negative | 4539835 - 4541016 | 42423.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

