Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_4328 | Not Available | Negative | 4519401 - 4519982 | 21754.7 |
| dna polymerase-4 | SAMN04244553_4329 | Not Available | Positive | 4520110 - 4521234 | 40724.8 |
| putative quinone oxidoreductase, yhdh/yhfp family | SAMN04244553_4330 | Not Available | Positive | 4521377 - 4522372 | 34361.9 |
| atp-binding cassette, subfamily c | SAMN04244553_4331 | Not Available | Negative | 4522430 - 4524310 | 67382.2 |
| fad/fmn-containing dehydrogenase | SAMN04244553_4332 | Not Available | Positive | 4524464 - 4527226 | 98318.4 |
| hypothetical protein | SAMN04244553_4333 | Not Available | Negative | 4527309 - 4527749 | 13834.7 |
| 3-methyladenine dna glycosylase/8-oxoguanine dna glycosylase | SAMN04244553_4334 | Not Available | Positive | 4528095 - 4529036 | 34623.3 |
| hypothetical protein | SAMN04244553_4335 | Not Available | Negative | 4529086 - 4529292 | 7547.29 |
| hypothetical protein | SAMN04244553_4336 | Not Available | Negative | 4529292 - 4529612 | 11143.5 |
| helix-turn-helix domain-containing protein | SAMN04244553_4337 | Not Available | Positive | 4529930 - 4530859 | 34492.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

