Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_4308 | Not Available | Positive | 4496793 - 4498250 | 48910.8 |
| hypothetical protein | SAMN04244553_4309 | Not Available | Negative | 4498303 - 4498977 | 22446.9 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_4310 | Not Available | Positive | 4499468 - 4500322 | 29629.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_4311 | Not Available | Positive | 4500327 - 4501190 | 30402.8 |
| virulence factor mce family protein | SAMN04244553_4312 | Not Available | Positive | 4501198 - 4502676 | 51941.5 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_4313 | Not Available | Positive | 4502750 - 4503793 | 37011.4 |
| virulence factor mce family protein | SAMN04244553_4314 | Not Available | Positive | 4503790 - 4504788 | 35714.3 |
| virulence factor mce family protein | SAMN04244553_4315 | Not Available | Positive | 4504788 - 4505897 | 39185.3 |
| virulence factor mce family protein | SAMN04244553_4316 | Not Available | Positive | 4505894 - 4506997 | 38666.1 |
| virulence factor mce family protein | SAMN04244553_4317 | Not Available | Positive | 4506994 - 4508172 | 41636.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

