Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_4298 | Not Available | Positive | 4486896 - 4487387 | 17268.1 |
| hypothetical protein | SAMN04244553_4299 | Not Available | Negative | 4487394 - 4487936 | 19175.9 |
| helix-turn-helix domain-containing protein | SAMN04244553_4300 | Not Available | Positive | 4488066 - 4488917 | 31172.6 |
| protein of unknown function | SAMN04244553_4301 | Not Available | Positive | 4488928 - 4489305 | 13716.8 |
| putative endopeptidase | SAMN04244553_4302 | Not Available | Positive | 4489415 - 4491430 | 74691.4 |
| sn-glycerol 3-phosphate transport system atp-binding protein | SAMN04244553_4303 | Not Available | Negative | 4491444 - 4492526 | 39564.4 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04244553_4304 | Not Available | Negative | 4492763 - 4493665 | 32037.5 |
| cytochrome p450 | SAMN04244553_4305 | Not Available | Negative | 4494036 - 4495379 | 49329.4 |
| hypothetical protein | SAMN04244553_4306 | Not Available | Negative | 4495430 - 4495948 | 16547.3 |
| hypothetical protein | SAMN04244553_4307 | Not Available | Positive | 4496159 - 4496776 | 20794.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

