Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(a) polymerase | SAMN04244553_4288 | Not Available | Positive | 4476627 - 4478084 | 54163.7 |
| hypothetical protein | SAMN04244553_4289 | Not Available | Negative | 4478100 - 4478915 | 30286.8 |
| upf0271 protein | SAMN04244553_4290 | Not Available | Positive | 4479054 - 4479806 | 25550.4 |
| sensor histidine kinase inhibitor, kipi family | SAMN04244553_4291 | Not Available | Positive | 4479819 - 4480496 | 24097.4 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN04244553_4292 | Not Available | Positive | 4480493 - 4481350 | 29673.7 |
| protein of unknown function | SAMN04244553_4293 | Not Available | Negative | 4481352 - 4482986 | 57985.1 |
| hypothetical protein | SAMN04244553_4294 | Not Available | Positive | 4483121 - 4483702 | 20199.7 |
| hypothetical protein | SAMN04244553_4295 | Not Available | Negative | 4483874 - 4485136 | 42198.5 |
| 8-oxo-dgtp diphosphatase | SAMN04244553_4296 | Not Available | Negative | 4485245 - 4485706 | 16975.2 |
| hypothetical protein | SAMN04244553_4297 | Not Available | Positive | 4485969 - 4486757 | 28619.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

