Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virginiamycin b lyase | SAMN04244553_0522 | Not Available | Positive | 332820 - 333677 | 29793.2 |
| von willebrand factor type a domain-containing protein | SAMN04244553_0523 | Not Available | Negative | 333892 - 335508 | 54826.6 |
| transcription factor whib | SAMN04244553_0524 | Not Available | Negative | 335699 - 335971 | 9882.44 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN04244553_0525 | Not Available | Negative | 335996 - 336541 | 20266.3 |
| hypothetical protein | SAMN04244553_0526 | Not Available | Negative | 336686 - 336805 | 4315.95 |
| electron transfer dm13 | SAMN04244553_0527 | Not Available | Negative | 336930 - 337475 | 19109.8 |
| acyl-coa dehydrogenase | SAMN04244553_0528 | Not Available | Negative | 337548 - 338660 | 39002.6 |
| transcriptional regulator, hxlr family | SAMN04244553_0529 | Not Available | Positive | 338778 - 339470 | 25831.2 |
| duf218 domain-containing protein | SAMN04244553_0530 | Not Available | Negative | 339562 - 340140 | 21607.3 |
| hypothetical protein | SAMN04244553_0531 | Not Available | Negative | 340217 - 341416 | 43338.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

