Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN04244553_4238 | Not Available | Negative | 4422833 - 4423306 | 17349.4 |
| riboflavin-specific deaminase c-terminal domain-containing protein | SAMN04244553_4239 | Not Available | Negative | 4423337 - 4424026 | 24381.2 |
| para-aminobenzoate synthetase component 2 | SAMN04244553_4240 | Not Available | Negative | 4424023 - 4424667 | 22856.3 |
| uncharacterised protein family (upf0233) | SAMN04244553_4241 | Not Available | Positive | 4424866 - 4425129 | 9997.67 |
| ph domain-containing protein | SAMN04244553_4242 | Not Available | Positive | 4425221 - 4425685 | 16506.2 |
| membrane associated serine protease, rhomboid family | SAMN04244553_4243 | Not Available | Negative | 4425946 - 4426815 | 30089.6 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN04244553_4244 | Not Available | Negative | 4426820 - 4427356 | 19049.4 |
| hypothetical protein | SAMN04244553_4245 | Not Available | Positive | 4427517 - 4427729 | 7198.73 |
| abc-2 type transport system permease protein | SAMN04244553_4246 | Not Available | Negative | 4427736 - 4428593 | 31091.8 |
| abc-2 type transport system atp-binding protein | SAMN04244553_4247 | Not Available | Negative | 4428590 - 4429642 | 37071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

