Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_4198 | Not Available | Positive | 4374072 - 4374704 | 22763.7 |
| hypothetical protein | SAMN04244553_4199 | Not Available | Positive | 4374719 - 4375282 | 18501.4 |
| uncharacterized protein ycni | SAMN04244553_4200 | Not Available | Positive | 4375322 - 4375972 | 22276.9 |
| hypothetical protein | SAMN04244553_4201 | Not Available | Positive | 4375969 - 4376538 | 19238.9 |
| putative copper resistance protein d | SAMN04244553_4202 | Not Available | Positive | 4376546 - 4377475 | 31505.2 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_4203 | Not Available | Positive | 4377514 - 4377969 | 16461.7 |
| hypothetical protein | SAMN04244553_4204 | Not Available | Positive | 4378053 - 4378418 | 14454.1 |
| regulator of ribonuclease activity a | SAMN04244553_4205 | Not Available | Positive | 4378586 - 4379059 | 16461.5 |
| ribosome-associated protein | SAMN04244553_4206 | Not Available | Negative | 4379068 - 4379289 | 7813.4 |
| lysyl-trna synthetase, class 2 | SAMN04244553_4207 | Not Available | Positive | 4379406 - 4382729 | 122513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

