Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN04244553_4187 | Not Available | Negative | 4362837 - 4363544 | 25194.6 |
| superoxide dismutase, fe-mn family | SAMN04244553_4188 | Not Available | Positive | 4363738 - 4364361 | 23055.0 |
| hypothetical protein | SAMN04244553_4189 | Not Available | Positive | 4364698 - 4365225 | 18194.9 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04244553_4190 | Not Available | Positive | 4365435 - 4366253 | 29402.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_4191 | Not Available | Negative | 4366322 - 4367140 | 28367.0 |
| short-chain dehydrogenase | SAMN04244553_4192 | Not Available | Positive | 4367242 - 4368120 | 30587.2 |
| transcriptional regulator, tetr family | SAMN04244553_4193 | Not Available | Positive | 4368187 - 4368858 | 24295.9 |
| putative ca2+/h+ antiporter, tmem165/gdt1 family | SAMN04244553_4194 | Not Available | Negative | 4368899 - 4369618 | 24866.8 |
| molecular chaperone htpg | SAMN04244553_4196 | Not Available | Negative | 4370022 - 4371980 | 74507.0 |
| recb family nuclease, putative, tm0106 family | SAMN04244553_4197 | Not Available | Negative | 4372065 - 4373915 | 68011.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

