Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad(p)+) | SAMN04244553_4167 | Not Available | Positive | 4345267 - 4347015 | 62217.2 |
| septum formation | SAMN04244553_4168 | Not Available | Positive | 4347075 - 4348217 | 40106.1 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN04244553_4169 | Not Available | Positive | 4348231 - 4348581 | 13094.4 |
| pe family protein | SAMN04244553_4170 | Not Available | Positive | 4348774 - 4349097 | 10693.9 |
| ppe family protein | SAMN04244553_4171 | Not Available | Positive | 4349132 - 4350286 | 37459.0 |
| espg family protein | SAMN04244553_4172 | Not Available | Positive | 4350283 - 4351110 | 29842.4 |
| probable phosphoglycerate mutase | SAMN04244553_4173 | Not Available | Negative | 4351258 - 4351932 | 24093.5 |
| prephenate dehydratase | SAMN04244553_4174 | Not Available | Negative | 4351929 - 4352843 | 31931.9 |
| hypothetical protein | SAMN04244553_4175 | Not Available | Negative | 4352929 - 4353354 | 14269.0 |
| protein of unknown function | SAMN04244553_4176 | Not Available | Positive | 4353477 - 4354238 | 26719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

